TXFMulder: They're here aren't they?
Deep Throat: Mr. Mulder, THEY'VE been here for a long, long time.
TXFDeep Throat: Trust no one.
TXFScully: It seems to me that the best relationships, the ones that last, are frequently the ones that are rooted in friendship. You know, one day you look at the person and you see something more than you did the night before. Like a switch has been flicked somewhere. And the person who was just a friend is suddenly the only person you can ever imagine yourself with.
TXFThe Cigarette Smoking Man: It's a scary story. You want to come sit on my lap?
Scully: You don't scare me.
The Cigarette Smoking Man: My story's scared every president since Truman in '47.
TXFThe Cigarette Smoking Man: Life is like a box of chocolates. A cheap, thoughtless, perfunctory gift that nobody ever asks for. Unreturnable because all you get back is another box of chocolates. So you're stuck with this undefinable whipped mint crap that you mindlessly wolf down when there's nothing else left to eat. Sure, once in a while there's a peanut butter cup or an English toffee. But they're gone too fast and the taste is... fleeting. So, you end up with nothing but broken bits filled with hardened jelly and teeth-shattering nuts. And if you're desperate enough to eat those, all you got left is an empty box filled with useless brown paper wrappers.
TXFSmoking Man: "How many historic events have only the two of us witnessed, Ronal? How often did we make or change history? And our names can never grace any pages of record. No monument will ever bear our image. And yet once again, the course of human history will be set by two unknown men standing in the shadows." [deep Throat offers the Smoking Man his gun] "A living EBE could advance Bill Mulder's project by decades.
Deep Throat: "Security council resolution 10.13 states; any country capturing such an entity is responsible for its immediate extermination. I'm the liar, you're the killer."
Smoking Man: "Your lies have killed more men in a day than I have in a lifetime. I've never killed anybody."
Deep Throat: "Maybe I'm not the liar."
TXFScully: Thanks for ditching me.
Mulder: I'm sorry, I, uh... I couldn't let you risk your life on this.
Scully: Did you find what you were looking for?
Mulder: No... no. But I found something I thought I'd lost.
Mulder: Faith to keep looking.